PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC05G05600.2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 356aa    MW: 39496.7 Da    PI: 9.3653
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC05G05600.2genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1157.8e-36482001128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra......... 77 
                      +p+G+rF+Ptd+el+ e+L++kv++        ++++ + i+   +i++++P++Lp  v+ +  + +fF++++k+y+tg+rk+r+         
  OPUNC05G05600.2  48 MPAGVRFDPTDQELI-EHLEAKVKDGGstshplIDEFIHtIQGEdGICYTHPENLP-GVTMDGLSKHFFHRSAKAYPTGTRKRRKvladqpddq 139
                      699************.99******9987777664443344777756**********.455567899******************88******** PP

              NAM  78 .........tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                               +++ +W++tgk++++++ +g+ +g+kk+Lv+y   g+++k+ekt+Wvmh+y+l
  OPUNC05G05600.2 140 pqasksrnvAAETRWHKTGKTRAIMV-RGQPKGCKKILVLYtnFGKKRKSEKTNWVMHQYHL 200
                      *****999978999************.999***********54479999***********98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019418.89E-3740219IPR003441NAC domain
PROSITE profilePS5100531.17348219IPR003441NAC domain
PfamPF023651.7E-1649200IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    Send to blast
MSSDGASGSI GMKHDDDDHR PITGASSRRC PSCGHDPDCN KPFDMVGMPA GVRFDPTDQE  60
LIEHLEAKVK DGGSTSHPLI DEFIHTIQGE DGICYTHPEN LPGVTMDGLS KHFFHRSAKA  120
YPTGTRKRRK VLADQPDDQP QASKSRNVAA ETRWHKTGKT RAIMVRGQPK GCKKILVLYT  180
NFGKKRKSEK TNWVMHQYHL GELEDEKEGE LILSKVFYQT QTRSAAATET PVSSGASMKV  240
QGQQQQVLKL ADDGQFSSVP TKKRLHEDAV AQVKVDRGHH CMQAQRHVSF NLKATPVPTI  300
SSFPVVVDKQ LYSPVALFRS EHVHVGKNFN SSTTKRQIGL TSAGLLTTNI NMDKWC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A9e-144220211144NO APICAL MERISTEM PROTEIN
1ut4_B9e-144220211144NO APICAL MERISTEM PROTEIN
1ut7_A9e-144220211144NO APICAL MERISTEM PROTEIN
1ut7_B9e-144220211144NO APICAL MERISTEM PROTEIN
3swm_A9e-144220214147NAC domain-containing protein 19
3swm_B9e-144220214147NAC domain-containing protein 19
3swm_C9e-144220214147NAC domain-containing protein 19
3swm_D9e-144220214147NAC domain-containing protein 19
3swp_A9e-144220214147NAC domain-containing protein 19
3swp_B9e-144220214147NAC domain-containing protein 19
3swp_C9e-144220214147NAC domain-containing protein 19
3swp_D9e-144220214147NAC domain-containing protein 19
4dul_A9e-144220211144NAC domain-containing protein 19
4dul_B9e-144220211144NAC domain-containing protein 19
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK2422270.0AK242227.1 Oryza sativa Japonica Group cDNA, clone: J075175B09, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015637950.10.0PREDICTED: NAC domain-containing protein 73 isoform X2
SwissprotO494595e-86NAC73_ARATH; NAC domain-containing protein 73
TrEMBLA0A0E0KZF90.0A0A0E0KZF9_ORYPU; Uncharacterized protein
STRINGBGIOSGA018654-PA0.0(Oryza sativa Indica Group)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP174251011
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29230.13e-87NAC domain containing protein 75